Release Date: 2017-12-04
Publication DOI: 10.1371/journal.pone.0199918
Data DOI: 10.17867/10000110
License: CC BY 4.0
PubMed ID: 30048451
PMC ID: PMC6062017
We have adapted the mouse kidney rudiment assay to generate renal organoids. We have immunostained endpoint fixed organoids and E13.5 embryonic kidneys and imaged them with a light sheet fluorescent microscope. The data generated for this manuscript is made accessible here and includes immunofluorescence staining after end point fixation revealing that organotypic structures develop within the organoids. Furthermore, we have performed an assay to ascertain tubular functionality. Following, we have imaged organoids containing Wt1-GFP knock-in cells live on the light sheet microscope to evaluate the ability to follow cells long-term and generate previously unavailable quantitative tracking data.\n\nidr0038 consists of a set of 3 experiments: experimentA (immunofluorescence staining after end point fixation), experimentB (assays to ascertain tubular functionality) and experimentC (Wt1-GFP knock-in cells followed long term).
Held M, Santeramo I, Wilm B, Murray P, Lévy R
idr0038-held-kidneylightsheet ()
idr0038-held-kidneylightsheet/experimentA ()
idr0038-held-kidneylightsheet/experimentB ()
idr0038-held-kidneylightsheet/experimentC ()
BioFile Finder
BioFile Finder is a tool for filtering, sorting and grouping tabular data. Each table below is loaded from IDR as a Parquet file, with each row representing an image. Images can be selected in BioFile Finder and the "Download" link will open them in the IDR viewer.
idr0038-held-kidneylightsheet ( , parquet: )
experimentA ( , parquet: )
experimentB ( , parquet: )
experimentC ( , parquet: )
To download original image files in your browser, you can access original data.
Download as JSON.
For more download options, including bulk download using Globus or FTP clients, see the IDR Data download page.
Copyright: Held et al
Data Publisher: University of Dundee
© 2016-2026 University of Dundee & Open Microscopy Environment. Creative Commons Attribution 4.0 International License.
OMERO is distributed under the terms of the GNU GPL. For more information, visit openmicroscopy.org