List of reference ontologies and databases used in IDR.
Domain | Resource |
---|---|
Clinical/Pathology | SNOMED CT |
Compound | PubChem |
Gene | Ensembl |
Gene | NCBI Gene |
Imaging Method | Biological Imaging Methods Ontology (FBbi) |
Organism | NCBI Taxonomy |
Phenotype | Cellular Microscopy Phenotype Ontology (CMPO) |
Protein | UniProt |
Study type, Screen Type (HCS), Screen Technology Type (HCS), Library Type (HCS), Protocol | Experimental Factor Ontology (EFO) |